after SCALEX integration
Map new data to the embeddings of reference
A pancreas reference was created by integrating eight batches.
Here, map pancreas_gse81547, pancreas_gse83139 and pancreas_gse114297 to the embeddings of pancreas reference.
Annotate cells in new data through label transfer
Label transfer tabula muris data and mouse kidney data from mouse atlas reference
mouse atlas reference
query tabula muris aging and query mouse kidney
Integrate scRNA-seq and scATAC-seq dataset
Spatial data (To be updated)
Integrating spatial data with scRNA-seq